********
Taxonomy
********

.. admonition:: See Also
   :class: note

   Taxonomy functions are implemented as part of ``SampleCollection``. For more
   information, see :doc:`sample_collection`.

``tree_build``
==============

.. automethod:: onecodex.models.collection.SampleCollection.tree_build

``tree_prune_rank``
===================

.. automethod:: onecodex.models.collection.SampleCollection.tree_prune_rank

``tree_prune_tax_ids``
======================

.. automethod:: onecodex.models.collection.SampleCollection.tree_prune_tax_ids